Onya Opota

Publications | Mémoires et thèses

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76 publications

Sous presse | 2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2008 |
Sous presse
 
Correction to: Added diagnostic value of 16S rRNA gene pan-mycobacterial PCR for nontuberculous mycobacterial infections: a 10-year retrospective study.
Andenmatten S., Opota O., Mazza-Stalder J., Nicod L., Greub G., Jaton K. European journal of clinical microbiology & infectious diseases. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E4A965E41817]
 
Tularemia on the rise in Switzerland? A one health approach is needed!
Buettcher M., Egli A., Albini S., Altpeter E., Labutin A., Guidi V., Tonolla M., Lienhard R., Opota O., Schmid P. et al. Infection. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_07E001134BB6]
2024
Investigations of an increased incidence of non-Aspergillus invasive mould infections in an onco-haematology unit.
Stavropoulou E., Huguenin A., Caruana G., Opota O., Perrottet N., Blanc D.S., Grandbastien B., Senn L., Bochud P.Y., Lamoth F., 2024/03/26. Swiss medical weekly, 154 p. 3730. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_4091A856E587]
2023
 
Nanomotion technology in combination with machine learning: a new approach for a rapid antibiotic susceptibility test for Mycobacterium tuberculosis.
Vocat A., Sturm A., Jóźwiak G., Cathomen G., Świątkowski M., Buga R., Wielgoszewski G., Cichocka D., Greub G., Opota O., 2023/10. Microbes and infection, 25 (7) p. 105151. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6922CABC8BD6]
 
Temporal changes in fecal microbiota of patients infected with COVID-19: a longitudinal cohort.
Galperine T., Choi Y., Pagani J.L., Kritikos A., Papadimitriou-Olivgeris M., Méan M., Scherz V., Opota O., Greub G., Guery B. et al., 2023/08/18. BMC infectious diseases, 23 (1) p. 537. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C4AC9A4A0DF4]
 
Oedème palpébral 24 heures après le premier vaccin contre le COVID-19
Dao Mai-Chi Diane, Opota Onya, Blum Sabine, 2023/08/16. Forum Médical Suisse ‒ Swiss Medical Forum.
[DOI][serval:BIB_03E4EDAE9BE2]
 
Rectal shedding of monkeypox virus in a patient coinfected with Chlamydia trachomatis and Neisseria gonorrhoeae: a case report.
Desgranges F., Glampedakis E., Christinet V., Encarnação S., Fernandes C., Greub G., Opota O., Cavassini M., 2023/03/06. Journal of medical case reports, 17 (1) p. 94. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4F21C7D1F691]
 
Overruling of Procalcitonin-Guided Antibiotics for Lower Respiratory Tract Infections in Primary Care: Ancillary Study of a Randomized Controlled Trial.
Knüsli J., Lhopitallier L., Kronenberg A., Meuwly J.Y., Opota O., Perrenoud M.A., Page M.A., Kain K.C., Mamin A., D'Acremont V. et al., 2023/02/12. Antibiotics, 12 (2) p. 377. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_B2E38A89B4D4]
Antigen rapid tests, nasopharyngeal PCR and saliva PCR to detect SARS-CoV-2: A prospective comparative clinical trial.
Schwob J.M., Miauton A., Petrovic D., Perdrix J., Senn N., Gouveia A., Jaton K., Opota O., Maillard A., Minghelli G. et al., 2023. PloS one, 18 (2) pp. e0282150. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E11C27628AE5]
 
Beyond Traditional Culture: New Approaches for a Rapid Detection and Identification of Microorganisms and their Antimicrobial Resistance
Jordana-Lluch Elena, Mancini Nicasio, W. A. Rossen John, Opota Onya, 2023., Frontier Media SA.
[URN][DOI][serval:BIB_7A94974A04CB]
Performance of microbiological tests for tuberculosis diagnostic according to the type of respiratory specimen: A 10-year retrospective study.
Boldi M.O., Denis-Lessard J., Neziri R., Brouillet R., von-Garnier C., Chavez V., Mazza-Stalder J., Jaton K., Greub G., Opota O., 2023. Frontiers in cellular and infection microbiology, 13 p. 1131241. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F4A71366B41B]
2022
 
Comparison of Nasopharyngeal and Saliva Swab Nucleic Acid Amplification and Rapid Antigen Testing To Detect Omicron SARS-CoV-2 Variant of Concern: a Prospective Clinical Trial (OMICRON).
Kritikos A., Caruana G., Lazor-Blanchet C., Currat M., Chiche J.D., Vollenweider P., Bart P.A., Opota O., Greub G., 2022/12/21. Microbiology spectrum, 10 (6) pp. e0392322. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6A6FC8A196FD]
 
A battery of tandem mass spectrometry assays with stable isotope-dilution for the quantification of 15 anti-tuberculosis drugs and two metabolites in patients with susceptible-, multidrug-resistant- and extensively drug-resistant tuberculosis.
Mercier T., Desfontaine V., Cruchon S., Da Silva Pereira Clara J.A., Briki M., Mazza-Stalder J., Kajkus A., Burger R., Suttels V., Buclin T. et al., 2022/11/15. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 1211 p. 123456. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8BD27ECE6B02]
 
Antibody response and intra-host viral evolution after plasma therapy in COVID-19 patients pre-exposed or not to B-cell-depleting agents.
Gachoud D., Pillonel T., Tsilimidos G., Battolla D., Dumas D., Opota O., Fontana S., Vollenweider P., Manuel O., Greub G. et al., 2022/11. British journal of haematology, 199 (4) pp. 549-559. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_801AF06A907A]
Utility of Polymerase Chain Reaction in Nasopharyngeal Swabs for Identifying Respiratory Bacteria Causing Community-Acquired Pneumonia.
Demars Y., Brahier T., Rotzinger D.C., Brouillet R., Jaton K., Opota O., Boillat-Blanco N., 2022/06/29. Microbiology spectrum, 10 (3) pp. e0037922. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_28C85C8A071E]
 
Post‑COVID‑19 Syndrome in Outpatients: a Cohort Study.
Desgranges F., Tadini E., Munting A., Regina J., Filippidis P., Viala B., Karachalias E., Suttels V., Haefliger D., Kampouri E. et al., 2022/06. Journal of general internal medicine, 37 (8) pp. 1943-1952. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_284F4C167E6F]
Assessment of SARS-CoV-2 tests costs and reimbursement tariffs readjustments during the COVID-19 pandemic.
Caruana G., Brouillet R., Opota O., Greub G., 2022/05/09. Swiss medical weekly, 152 pp. w30168. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AF0452B7EBED]
Tularémie pulmonaire : un diagnostic à ne pas manquer [Pulmonary tularemia : a diagnosis not to be missed]
Uriel Valladares P., Opota O., Beigelman-Aubry C., Bochud P.Y., Lamoth F., 2022/04/13. Revue medicale suisse, 18 (777) pp. 707-711. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_4200435B5420]
A refractory tenosynovitis of the wrist: a case report.
Boudon A., Opota O., Dan D., 2022/02/21. Journal of medical case reports, 16 (1) p. 75. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F1C308C34E6B]
 
External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories.
Wegner F., Roloff T., Huber M., Cordey S., Ramette A., Gerth Y., Bertelli C., Stange M., Seth-Smith HMB, Mari A. et al., 2022/01/19. Journal of clinical microbiology, 60 (1) pp. e0169821. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2E7163A8114F]
2021
 
Multicenter Technical Validation of 30 Rapid Antigen Tests for the Detection of SARS-CoV-2 (VALIDATE).
Greub G., Caruana G., Schweitzer M., Imperiali M., Muigg V., Risch M., Croxatto A., Opota O., Heller S., Albertos Torres D. et al., 2021/12/15. Microorganisms, 9 (12) p. 2589. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F3DCE9F873C8]
 
Size and duration of COVID-19 clusters go along with a high SARS-CoV-2 viral load: A spatio-temporal investigation in Vaud state, Switzerland.
Ladoy A., Opota O., Carron P.N., Guessous I., Vuilleumier S., Joost S., Greub G., 2021/09/15. The Science of the total environment, 787 p. 147483. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7472C94BBC88]
 
Sensitivity of Rapid Antigen Testing and RT-PCR Performed on Nasopharyngeal Swabs versus Saliva Samples in COVID-19 Hospitalized Patients: Results of a Prospective Comparative Trial (RESTART).
Kritikos A., Caruana G., Brouillet R., Miroz J.P., Abed-Maillard S., Stieger G., Opota O., Croxatto A., Vollenweider P., Bart P.A. et al., 2021/09/09. Microorganisms, 9 (9) p. 1910. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F1553D2BFA41]
Interseasonal RSV infections in Switzerland - rapid establishment of a clinician-led national reporting system (RSV EpiCH).
von Hammerstein A.L., Aebi C., Barbey F., Berger C., Buettcher M., Casaulta C., Egli A., Gebauer M., Guerra B., Kahlert C. et al., 2021/08/30. Swiss medical weekly, 151 pp. w30057. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_063E2ED6F072]
Performance of RT-PCR on Saliva Specimens Compared With Nasopharyngeal Swabs for the Detection of SARS-CoV-2 in Children: A Prospective Comparative Clinical Trial.
Fougère Y., Schwob J.M., Miauton A., Hoegger F., Opota O., Jaton K., Brouillet R., Greub G., Genton B., Gehri M. et al., 2021/08/01. The Pediatric infectious disease journal, 40 (8) pp. e300-e304. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_420EB68B8459]
The dark side of SARS-CoV-2 rapid antigen testing: screening asymptomatic patients.
Caruana G., Lebrun L.L., Aebischer O., Opota O., Urbano L., de Rham M., Marchetti O., Greub G., 2021/07. New microbes and new infections, 42 p. 100899. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B2C6AA99CFBC]
Impact of different SARS-CoV-2 assays on laboratory turnaround time.
Marquis B., Opota O., Jaton K., Greub G., 2021/05. Journal of medical microbiology, 70 (5). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_568573E3CB88]
Transplantation de microbiote fécal : de l’évidence aux réalités du terrain [Fecal microbiota transplantation: from the evidence to the realty of the field]
Ballif A., Gerber S., Carrez L., Audry M., Sadeghipour F., Mitouassiwou A., Croxatto A., Opota O., Prod'hom G., Henchoz S. et al., 2021/04/14. Revue medicale suisse, 17 (734) pp. 726-731. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_6F57B9B68184]
 
Implementing SARS-CoV-2 Rapid Antigen Testing in the Emergency Ward of a Swiss University Hospital: The INCREASE Study.
Caruana G., Croxatto A., Kampouri E., Kritikos A., Opota O., Foerster M., Brouillet R., Senn L., Lienhard R., Egli A. et al., 2021/04/10. Microorganisms, 9 (4) p. 798. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0FC767B1B433]
SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing.
Goncalves Cabecinhas A.R., Roloff T., Stange M., Bertelli C., Huber M., Ramette A., Chen C., Nadeau S., Gerth Y., Yerly S. et al., 2021/03/25. Microorganisms, 9 (4) p. 677. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C7CA145091AD]
 
An Automated Dashboard to Improve Laboratory COVID-19 Diagnostics Management.
Maury E., Boldi M.O., Greub G., Chavez V., Jaton K., Opota O., 2021. Frontiers in digital health, 3 p. 773986. Peer-reviewed.
[DOI][Pmid][serval:BIB_F755C62F731E]
 
Computer-Aided Medical Microbiology Monitoring Tool: A Strategy to Adapt to the SARS-CoV-2 Epidemic and That Highlights RT-PCR Consistency.
Mueller L., Scherz V., Greub G., Jaton K., Opota O., 2021. Frontiers in cellular and infection microbiology, 11 p. 594577. Peer-reviewed.
[DOI][Pmid][serval:BIB_6B431B99FDA3]
 
Editorial: Tuberculosis and Non-tuberculous Mycobacteria Infections: Control, Diagnosis and Treatment.
Opota O., Mazza-Stalder J., Viveiros M., Cambau E., Santin M., Goletti D., 2021. Frontiers in public health, 9 p. 666187. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D1B12026BB66]
2020
 
NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test
Dylus David, Pillonel Trestan, Opota Onya, Wüthrich Daniel, Seth-Smith Helena M. B., Egli Adrian, Leo Stefano, Lazarevic Vladimir, Schrenzel Jacques, Laurent Sacha et al., 2020/11/24. Frontiers in Microbiology, 11. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_347E9A7AF57F]
 
Comparison of SARS-CoV-2 RT-PCR on a high-throughput molecular diagnostic platform and the cobas SARS-CoV-2 test for the diagnostic of COVID-19 on various clinical samples.
Opota O., Brouillet R., Greub G., Jaton K., 2020/11/11. Pathogens and disease, 78 (8) pp. ftaa061. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_50F61B3E6CFD]
 
Universal admission screening strategy for COVID-19 highlighted the clinical importance of reporting SARS-CoV-2 viral loads.
Moraz M., Jacot D., Papadimitriou-Olivgeris M., Senn L., Greub G., Jaton K., Opota O., 2020/11. New microbes and new infections, 38 p. 100820. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C560AB96A04F]
Diagnostic strategies for SARS-CoV-2 infection and interpretation of microbiological results.
Caruana G., Croxatto A., Coste A.T., Opota O., Lamoth F., Jaton K., Greub G., 2020/09. Clinical microbiology and infection, 26 (9) pp. 1178-1182. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EB349E4D572A]
 
Progressive multifocal leukoencephalopathy responsive to withdrawal of imatinib in a patient with FIP1L1-PDGFRA positive myeloid neoplasm.
Blum S., Dunet V., Comoli P., Tirefort Y., Chalandon Y., Opota O., Comte D., Spertini O., Livio F., Brouland J.P. et al., 2020/09. Leukemia & lymphoma, 61 (9) pp. 2226-2229. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_13EB95E6B61C]
Genome sequencing of Mycobacterium tuberculosis clinical isolates revealed isoniazid resistance mechanisms undetected by conventional molecular methods.
Laurent S., Zakham F., Bertelli C., Merz L., Nicod L., Mazza-Stalder J., Greub G., Jaton K., Opota O., 2020/08. International journal of antimicrobial agents, 56 (2) p. 106068. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_81020030909E]
SARS-CoV-2, un point dans la tourmente [SARS-CoV-2, a point in the storm]
Tadini E., Papamidimitriou-Olivgeris M., Opota O., Moulin E., Lamoth F., Manuel O., Lhopitallier L., Jaton K., Croxatto A., Grandbastien B. et al., 2020/05/06. Revue medicale suisse, 16 (692) pp. 917-923. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_88A8DA997C5D]
 
Compassionate Use of Letermovir in a 2-Year-Old Immunocompromised Child With Resistant Cytomegalovirus Disease.
Pérez Marín M., Decosterd L.A., Andre P., Buclin T., Mercier T., Murray K., Rizzi M., Meylan P., Jaton-Ogay K., Opota O. et al., 2020/02/28. Journal of the Pediatric Infectious Diseases Society, 9 (1) pp. 96-99. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_34AA25DDD16D]
Immunosuppressed gardener pricked by roses grows Legionella longbeachae.
Desgranges F., Coste A.T., Wernly D., Dufour J., Opota O., Meylan S., 2020/02/22. Lancet, 395 (10224) p. 604. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7D8B58E9D82E]
CAPNOCYTOPHAGA CANIMORSUS ENDOPHTHALMITIS AFTER CATARACT SURGERY LINKED TO SALIVARY DOG-TO-HUMAN TRANSMISSION.
Thommen F., Opota O., Greub G., Jaton K., Guex-Crosier Y., Wolfensberger T.J., Matet A., 2020. Retinal cases & brief reports, 14 (2) pp. 183-186. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_79ECF7D1096A]
Viral load of SARS-CoV-2 across patients and compared to other respiratory viruses.
Jacot D., Greub G., Jaton K., Opota O., 2020. Microbes and infection, 22 (10) pp. 617-621. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E9FEEDB7A5B4]
2019
The rapid molecular test Xpert MTB/RIF ultra: towards improved tuberculosis diagnosis and rifampicin resistance detection.
Opota O., Mazza-Stalder J., Greub G., Jaton K., 2019/11. Clinical microbiology and infection, 25 (11) pp. 1370-1376. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AB65E37DF14D]
Added diagnostic value of 16S rRNA gene pan-mycobacterial PCR for nontuberculous mycobacterial infections: a 10-year retrospective study.
Andenmatten S., Onya O., Mazza-Stalder J., Nicod L., Gilbert G., Katia J., 2019/10. European journal of clinical microbiology & infectious diseases, 38 (10) pp. 1873-1881. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_1FCD4700BC84]
Whole-genome sequencing for rapid, reliable and routine investigation of Mycobacterium tuberculosis transmission in local communities.
Zakham F., Laurent S., Esteves Carreira A.L., Corbaz A., Bertelli C., Masserey E., Nicod L., Greub G., Jaton K., Mazza-Stalder J. et al., 2019/09. New microbes and new infections, 31 p. 100582. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_604EC4A7CD3F]
Added Value of Xpert MTB/RIF Ultra for Diagnosis of Pulmonary Tuberculosis in a Low-Prevalence Setting.
Opota O., Zakham F., Mazza-Stalder J., Nicod L., Greub G., Jaton K., 2019/02. Journal of clinical microbiology, 57 (2). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7A47A167126E]
Improvement in Tuberculosis Outcomes With a Combined Medical and Social Approach.
Mazza-Stalder J., Chevallier E., Opota O., Carreira A., Jaton K., Masserey E., Zellweger J.P., Nicod L.P., 2019. Frontiers in medicine, 6 p. 135. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_11F402645AE4]
2018
How to: identify non-tuberculous Mycobacterium species using MALDI-TOF mass spectrometry.
Alcaide F., Amlerová J., Bou G., Ceyssens P.J., Coll P., Corcoran D., Fangous M.S., González-Álvarez I., Gorton R., Greub G. et al., 2018/06. Clinical microbiology and infection, 24 (6) pp. 599-603. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6D3B229D6392]
A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study
Walker Timothy M, Merker Matthias, Knoblauch Astrid M, Helbling Peter, Schoch Otto D, van der Werf Marieke J, Kranzer Katharina, Fiebig Lena, Kröger Stefan, Haas Walter et al., 2018/04. The Lancet Infectious Diseases, 18 (4) pp. 431-440.
[URN][DOI][Pmid][serval:BIB_4A2575D740A5]
Detection of respiratory bacterial pathogens causing atypical pneumonia by multiplex Lightmix<sup>®</sup> RT-PCR.
Wagner K., Springer B., Imkamp F., Opota O., Greub G., Keller P.M., 2018/04. International journal of medical microbiology, 308 (3) pp. 317-323. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D7A3ACFF6749]
2017
Genomics of the new species Kingella negevensis: diagnostic issues and identification of a locus encoding a RTX toxin.
Opota O., Laurent S., Pillonel T., Léger M., Trachsel S., Prod'hom G., Jaton K., Greub G., 2017/11. Microbes and infection, 19 (11) pp. 546-552. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A2A9CDA1BE86]
Mentor-mentee relationship in clinical microbiology.
Opota O., Greub G., 2017/07. Clinical microbiology and infection, 23 (7) pp. 448-453. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A204A82EC288]
Nanomechanical sensor applied to blood culture pellets: a fast approach to determine the antibiotic susceptibility against agents of bloodstream infections.
Stupar P., Opota O., Longo G., Prod'hom G., Dietler G., Greub G., Kasas S., 2017/06. Clinical microbiology and infection, 23 (6) pp. 400-405. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EC311BFF9523]
Applications of MALDI-TOF Mass Spectrometry in Clinical Diagnostic Microbiology
Opota Onya, Prod'hom Guy, Greub Gilbert, 2017/04/07. pp. 55-92 dans MALDI-TOF and Tandem MS for Clinical Microbiology, John Wiley & Sons, Ltd.
[URN][DOI][serval:BIB_F3E8E639815D]
Genome of the carbapenemase-producing clinical isolate Elizabethkingia miricola EM_CHUV and comparative genomics with Elizabethkingia meningoseptica and Elizabethkingia anophelis: evidence for intrinsic multidrug resistance trait of emerging pathogens.
Opota O., Diene S.M., Bertelli C., Prod'hom G., Eckert P., Greub G., 2017/01. International journal of antimicrobial agents, 49 (1) pp. 93-97. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_21829270BB0D]
Methods for Real-Time PCR-Based Diagnosis of Chlamydia pneumoniae, Chlamydia psittaci, and Chlamydia abortus Infections in an Opened Molecular Diagnostic Platform.
Opota O., Brouillet R., Greub G., Jaton K., 2017. Methods in molecular biology, 1616 pp. 171-181. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_FE3399E0B564]
2016
Révolution dans le monde de la Tuberculose
Opota Onya, Jaton Katia, 2016/10/04. Newsletter Microbiologie Diagnostic.
[URN][serval:BIB_C6F181CBD3ED]
Visceral leishmaniasis in a lung transplant recipient: usefulness of highly sensitive real-time polymerase chain reaction for preemptive diagnosis.
Opota O., Balmpouzis Z., Berutto C., Kaiser-Guignard J., Greub G., Aubert J.D., Prod'hom G., Manuel O., Jaton K., 2016/10. Transplant infectious disease, 18 (5) pp. 801-804. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_930664C96255]
Added value of molecular assay Xpert MTB/RIF compared to sputum smear microscopy to assess the risk of tuberculosis transmission in a low-prevalence country.
Opota O., Senn L., Prod'hom G., Mazza-Stalder J., Tissot F., Greub G., Jaton K., 2016/07. Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases, 22 (7) pp. 613-619. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_8C3FAFE42703]
 
Diagnosis of Aerococcus urinae infections: Importance of matrix-assisted laser desorption ionization time-of-flight mass spectrometry and broad-range 16S rDNA PCR.
Opota O., Prod'hom G., Andreutti-Zaugg C., Dessauges M., Merz L., Greub G., Chave J.P., Jaton K., 2016. Clinical Microbiology and Infection, 22 (1) pp. e1-e2. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_0488F22BE209]
Molecular and Mass Spectrometry Detection and Identification of Causative Agents of Bloodstream Infections
Opota Onya, Jaton Katia, Prod'hom Guy, Greub Gilbert, 2016. pp. 336-361 dans David Persing, Fred Tenover, Randall Hayden, Margareta Leven (eds.) Molecular Microbiology chap. 26, American Society of Microbiology.
[URN][DOI][serval:BIB_1ABBF674D970]
2015
 
Blood culture-based diagnosis of bacteraemia: state of the art.
Opota O., Croxatto A., Prod'hom G., Greub G., 2015. Clinical Microbiology and Infection, 21 (4) pp. 313-322. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7DD2E41A8965]
Improving the molecular diagnosis of Chlamydia psittaci and Chlamydia abortus infection with a species-specific duplex real-time PCR.
Opota O., Jaton K., Branley J., Vanrompay D., Erard V., Borel N., Longbottom D., Greub G., 2015. Journal of Medical Microbiology, 64 (10) pp. 1174-1185. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_1ADE67AB9165]
 
Microbial diagnosis of bloodstream infection: towards molecular diagnosis directly from blood.
Opota O., Jaton K., Greub G., 2015. Clinical Microbiology and Infection, 21 (4) pp. 323-331. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_107D523BF53E]
Pseudomonas entomophila: A Versatile Bacterium with Entomopathogenic Properties
Dieppois Guennaelle, Opota Onya, Lalucat Jorge, Lemaitre Bruno, 2015/01/01. pp. 25-49 dans Ramos Juan-Luis , Goldberg Johanna, Filloux Alain (eds.) Pseudomonas: Volume 7: New Aspects of Pseudomonas Biology, Springer.
[DOI][serval:BIB_E7E52186C592]
X-ray and Cryo-electron Microscopy Structures of Monalysin Pore-forming Toxin Reveal Multimerization of the Pro-form.
Leone P., Bebeacua C., Opota O., Kellenberger C., Klaholz B., Orlov I., Cambillau C., Lemaitre B., Roussel A., 2015. Journal of Biological Chemistry, 290 (21) pp. 13191-13201.
[DOI][Pmid][serval:BIB_1426D6EC1F2B]
2014
Bacteremia caused by Comamonas kerstersii in a patient with diverticulosis.
Opota O., Ney B., Zanetti G., Jaton K., Greub G., Prod'hom G., 2014. Journal of Clinical Microbiology, 52 (3) pp. 1009-1012. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6BD4CA6B1911]
2013
 
Crystallization and preliminary X-ray analysis of monalysin, a novel β-pore-forming toxin from the entomopathogen Pseudomonas entomophila.
Blemont M., Vincentelli R., Kellenberger C., Opota O., Lemaitre B., Roussel A., Leone P., 2013. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications, 69 (Pt 8) pp. 930-933. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CA0D78A28524]
2012
 
Guidelines for the use and interpretation of assays for monitoring autophagy.
Klionsky D.J., Abdalla F.C., Abeliovich H., Abraham R.T., Acevedo-Arozena A., Adeli K., Agholme L., Agnello M., Agostinis P., Aguirre-Ghiso J.A. et al., 2012/04. Autophagy, 8 (4) pp. 445-544. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_56859EA53CC8]
2011
Genetic evidence for a protective role of the peritrophic matrix against intestinal bacterial infection in Drosophila melanogaster
Kuraishi T., Binggeli O., Opota O., Buchon N., Lemaitre B., 2011/10/20. Proceedings of the National Academy of Sciences, 108 (38) pp. 15966-15971.
[DOI][serval:BIB_24AC2E152DFE]
Monalysin, a novel ß-pore-forming toxin from the Drosophila pathogen Pseudomonas entomophila, contributes to host intestinal damage and lethality.
Opota O., Vallet-Gély I., Vincentelli R., Kellenberger C., Iacovache I., Gonzalez M.R., Roussel A., van der Goot F.G., Lemaitre B., 2011/09/01. Plos Pathogens, 7 (9) pp. e1002259.
[DOI][Pmid][serval:BIB_F9D33D94FDE7]
Bacillus sphaericus binary toxin elicits host cell autophagy as a response to intoxication.
Opota O., Gauthier N.C., Doye A., Berry C., Gounon P., Lemichez E., Pauron D., 2011/02/01. Plos One, 6 (2) pp. e14682.
[DOI][Pmid][serval:BIB_F8415E12708A]
2010
A secondary metabolite acting as a signalling molecule controls Pseudomonas entomophila virulence
Vallet-Gely Isabelle, Opota Onya, Boniface Audrey, Novikov Alexey, Lemaitre Bruno, 2010. Cellular Microbiology, 12 (11) pp. 1666-1679.
[DOI][serval:BIB_5FC6023DF177]
2008
 
Identification and characterization of the receptor for the Bacillus sphaericus binary toxin in the malaria vector mosquito, Anopheles gambiae
Opota Onya, Charles Jean-François, Warot Sylvie, Pauron David, Darboux Isabelle, 2008. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 149 (3) pp. 419-427.
[DOI][serval:BIB_811497280B29]
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